Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 NQO2-204ENST00000380454 851 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PEBP1P3-201ENST00000455475 548 ntBASIC13.9□□□□□ -0.18
CACNA1BQ00975 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AL357143.1-203ENST00000639750 881 ntBASIC13.9□□□□□ -0.18
CACNA1BQ00975 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CACNA1BQ00975 AL138688.1-201ENST00000624851 1594 ntBASIC13.9□□□□□ -0.19
CACNA1BQ00975 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AC025183.3-201ENST00000623526 1482 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AC136604.1-202ENST00000425471 771 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 RN7SL300P-201ENST00000582522 318 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 PCDHB18P-201ENST00000524813 2368 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 LINC01144-201ENST00000626198 1710 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 NFIC-211ENST00000641145 8399 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 SNORA57-201ENST00000383870 149 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CACNA1BQ00975 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 BPIFB5P-201ENST00000457066 1099 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 RN7SL582P-201ENST00000491078 279 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 RNA5SP417-201ENST00000516459 108 ntBASIC13.89□□□□□ -0.19
CACNA1BQ00975 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.89□□□□□ -0.19
CACNA1BQ00975 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CACNA1BQ00975 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CACNA1BQ00975 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms