Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 CSPG4P11-201ENST00000560634 4910 ntBASIC13.16□□□□□ -0.3
AP3S2P59780 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
AP3S2P59780 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 AC027612.1-201ENST00000445234 2395 ntBASIC13.15□□□□□ -0.3
AP3S2P59780 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
AP3S2P59780 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.15□□□□□ -0.3
AP3S2P59780 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 AC136604.1-201ENST00000418535 575 ntBASIC13.15□□□□□ -0.3
AP3S2P59780 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.15□□□□□ -0.3
AP3S2P59780 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S2P59780 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S2P59780 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S2P59780 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S2P59780 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
AP3S2P59780 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 PRSS29P-201ENST00000440800 595 ntBASIC13.14□□□□□ -0.31
AP3S2P59780 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 OR7E14P-202ENST00000530490 1290 ntBASIC13.14□□□□□ -0.31
AP3S2P59780 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
AP3S2P59780 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.14□□□□□ -0.31
AP3S2P59780 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms