Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH4P55283 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH4P55283 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH4P55283 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CDH4P55283 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH4P55283 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH4P55283 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH4P55283 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH4P55283 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH4P55283 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH4P55283 AL008721.1-201ENST00000609964 604 ntBASIC15.54■□□□□ 0.08
CDH4P55283 AC006453.4-201ENST00000636949 1252 ntBASIC15.54■□□□□ 0.08
CDH4P55283 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH4P55283 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH4P55283 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH4P55283 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 AC091951.1-201ENST00000512854 2465 ntBASIC15.53■□□□□ 0.08
CDH4P55283 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH4P55283 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 POM121L8P-201ENST00000417732 1281 ntBASIC15.53■□□□□ 0.08
CDH4P55283 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH4P55283 POM121L9P-203ENST00000441984 1285 ntBASIC15.53■□□□□ 0.08
CDH4P55283 AL590640.2-201ENST00000457038 527 ntBASIC15.53■□□□□ 0.08
CDH4P55283 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH4P55283 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH4P55283 MIR4259-201ENST00000584466 101 ntBASIC15.53■□□□□ 0.08
CDH4P55283 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH4P55283 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 ECM1P1-201ENST00000604092 1279 ntBASIC15.53■□□□□ 0.08
CDH4P55283 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH4P55283 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH4P55283 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH4P55283 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH4P55283 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms