Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.57■□□□□ 0.56
PDE1AP54750 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.57■□□□□ 0.56
PDE1AP54750 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.57■□□□□ 0.56
PDE1AP54750 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDE1AP54750 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.57■□□□□ 0.56
PDE1AP54750 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE1AP54750 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE1AP54750 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDE1AP54750 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PDE1AP54750 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 AL162726.2-201ENST00000438986 1017 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 AC093433.1-201ENST00000458048 571 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 AC026434.2-201ENST00000506094 1078 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 AP001063.1-201ENST00000568332 529 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 AC138761.1-201ENST00000584393 385 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 AL033527.5-201ENST00000641382 801 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 MSTO2P-201ENST00000314835 1709 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE1AP54750 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PDE1AP54750 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE1AP54750 AC068418.2-201ENST00000577309 3703 ntBASIC18.56■□□□□ 0.56
PDE1AP54750 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 ACTBP8-201ENST00000403258 1108 ntBASIC18.55■□□□□ 0.56
PDE1AP54750 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.55■□□□□ 0.56
PDE1AP54750 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.55■□□□□ 0.56
PDE1AP54750 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 AC022137.2-201ENST00000503482 481 ntBASIC18.55■□□□□ 0.56
PDE1AP54750 AC022616.1-201ENST00000518688 554 ntBASIC18.55■□□□□ 0.56
PDE1AP54750 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.55■□□□□ 0.56
PDE1AP54750 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.55■□□□□ 0.56
PDE1AP54750 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 AC092364.2-202ENST00000597012 1073 ntBASIC18.55■□□□□ 0.56
PDE1AP54750 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
PDE1AP54750 AC005912.2-201ENST00000619492 2400 ntBASIC18.55■□□□□ 0.56
PDE1AP54750 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE1AP54750 FER1L4-210ENST00000615531 5998 ntBASIC18.55■□□□□ 0.56
PDE1AP54750 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE1AP54750 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
PDE1AP54750 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE1AP54750 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PDE1AP54750 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE1AP54750 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE1AP54750 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE1AP54750 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
PDE1AP54750 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE1AP54750 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms