Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 AC018529.2-202ENST00000611482 3087 ntBASIC15.13■□□□□ 0.01
ZNF140P52738 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ZNF140P52738 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF140P52738 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 BAATP1-201ENST00000412284 1225 ntBASIC15.12■□□□□ 0.01
ZNF140P52738 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 AC068587.3-201ENST00000526613 355 ntBASIC15.12■□□□□ 0.01
ZNF140P52738 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ZNF140P52738 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 AC099063.4-201ENST00000641099 1602 ntBASIC15.12■□□□□ 0.01
ZNF140P52738 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF140P52738 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF140P52738 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF140P52738 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF140P52738 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF140P52738 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF140P52738 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF140P52738 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZNF140P52738 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF140P52738 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF140P52738 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ZNF140P52738 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF140P52738 INE1-201ENST00000456273 945 ntBASIC15.11■□□□□ 0.01
ZNF140P52738 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF140P52738 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZNF140P52738 TDH-203ENST00000531764 1110 ntBASIC15.11■□□□□ 0.01
ZNF140P52738 PTP4A1P2-201ENST00000546033 454 ntBASIC15.11■□□□□ 0.01
ZNF140P52738 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF140P52738 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms