Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.02■□□□□ -0
GTF2A1P52655 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GTF2A1P52655 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
GTF2A1P52655 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.02■□□□□ -0
GTF2A1P52655 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.02■□□□□ -0
GTF2A1P52655 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
GTF2A1P52655 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
GTF2A1P52655 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 KLF4P1-201ENST00000412782 1185 ntBASIC15.02■□□□□ -0
GTF2A1P52655 AC113347.1-201ENST00000413321 391 ntBASIC15.02■□□□□ -0
GTF2A1P52655 HOMER2P1-201ENST00000455653 964 ntBASIC15.02■□□□□ -0
GTF2A1P52655 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.02■□□□□ -0
GTF2A1P52655 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.02■□□□□ -0
GTF2A1P52655 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
GTF2A1P52655 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.02■□□□□ -0
GTF2A1P52655 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.02■□□□□ -0
GTF2A1P52655 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.02□□□□□ -0.01
GTF2A1P52655 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
GTF2A1P52655 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.02□□□□□ -0.01
GTF2A1P52655 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GTF2A1P52655 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 AL353732.1-201ENST00000569618 1459 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 AC003669.1-201ENST00000334569 611 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 RNF152P1-201ENST00000397754 604 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.01□□□□□ -0.01
GTF2A1P52655 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.01□□□□□ -0.01
GTF2A1P52655 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 DUX4L17-201ENST00000557360 1267 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.01□□□□□ -0.01
GTF2A1P52655 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.01□□□□□ -0.01
GTF2A1P52655 KRT8P24-201ENST00000560290 1559 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
GTF2A1P52655 PCGF3-213ENST00000620529 1899 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.01□□□□□ -0.01
GTF2A1P52655 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GTF2A1P52655 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.01□□□□□ -0.01
GTF2A1P52655 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GTF2A1P52655 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 AC073508.3-201ENST00000619697 1419 ntBASIC15□□□□□ -0.01
GTF2A1P52655 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC15□□□□□ -0.01
GTF2A1P52655 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 407.7 ms