Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CPT1AP50416 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPT1AP50416 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.72■□□□□ 0.27
CPT1AP50416 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPT1AP50416 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
CPT1AP50416 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 RN7SKP230-201ENST00000365642 335 ntBASIC16.72■□□□□ 0.27
CPT1AP50416 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.72■□□□□ 0.27
CPT1AP50416 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.72■□□□□ 0.27
CPT1AP50416 AC012441.2-201ENST00000444843 739 ntBASIC16.72■□□□□ 0.27
CPT1AP50416 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.72■□□□□ 0.27
CPT1AP50416 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.72■□□□□ 0.27
CPT1AP50416 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
CPT1AP50416 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.72■□□□□ 0.27
CPT1AP50416 AC132192.2-201ENST00000596206 1147 ntBASIC16.72■□□□□ 0.27
CPT1AP50416 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.72■□□□□ 0.27
CPT1AP50416 AC079336.7-201ENST00000623428 1078 ntBASIC16.72■□□□□ 0.27
CPT1AP50416 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPT1AP50416 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPT1AP50416 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPT1AP50416 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 AL118508.1-201ENST00000613502 2345 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 RN7SKP214-201ENST00000364208 315 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.71■□□□□ 0.27
CPT1AP50416 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 FTLP1-201ENST00000449155 526 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.71■□□□□ 0.27
CPT1AP50416 SNORD3B-2-202ENST00000571722 791 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 MIR4706-201ENST00000582134 82 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.71■□□□□ 0.27
CPT1AP50416 AL132994.2-201ENST00000603120 687 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.71■□□□□ 0.27
CPT1AP50416 AP000346.4-201ENST00000614827 381 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 NAP1L6-202ENST00000641404 1222 ntBASIC16.71■□□□□ 0.27
CPT1AP50416 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CPT1AP50416 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPT1AP50416 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPT1AP50416 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.71■□□□□ 0.27
CPT1AP50416 PCDHB19P-201ENST00000570871 2371 ntBASIC16.71■□□□□ 0.26
CPT1AP50416 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPT1AP50416 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPT1AP50416 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPT1AP50416 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPT1AP50416 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.71■□□□□ 0.26
CPT1AP50416 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CPT1AP50416 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 AC006058.4-201ENST00000624016 1670 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.7■□□□□ 0.26
CPT1AP50416 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CPT1AP50416 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms