Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 AL138725.1-201ENST00000407347 1314 ntBASIC15.21■□□□□ 0.03
CSNK1DP48730 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CSNK1DP48730 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 AP000593.2-201ENST00000542775 1433 ntBASIC15.21■□□□□ 0.03
CSNK1DP48730 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.21■□□□□ 0.03
CSNK1DP48730 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.21■□□□□ 0.03
CSNK1DP48730 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.21■□□□□ 0.03
CSNK1DP48730 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CSNK1DP48730 AC106820.3-201ENST00000561653 397 ntBASIC15.21■□□□□ 0.03
CSNK1DP48730 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 MIR4259-201ENST00000584466 101 ntBASIC15.21■□□□□ 0.03
CSNK1DP48730 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.21■□□□□ 0.03
CSNK1DP48730 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.21■□□□□ 0.03
CSNK1DP48730 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1DP48730 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1DP48730 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1DP48730 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.21■□□□□ 0.02
CSNK1DP48730 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CSNK1DP48730 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CSNK1DP48730 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CSNK1DP48730 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CSNK1DP48730 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 AC144831.1-201ENST00000573312 2656 ntBASIC15.2■□□□□ 0.02
CSNK1DP48730 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.2■□□□□ 0.02
CSNK1DP48730 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CSNK1DP48730 AC099336.1-201ENST00000417053 1171 ntBASIC15.2■□□□□ 0.02
CSNK1DP48730 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 C2orf69P2-201ENST00000562032 1123 ntBASIC15.2■□□□□ 0.02
CSNK1DP48730 DUX4L45-201ENST00000566406 1057 ntBASIC15.2■□□□□ 0.02
CSNK1DP48730 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CSNK1DP48730 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 AC138696.2-201ENST00000607376 223 ntBASIC15.2■□□□□ 0.02
CSNK1DP48730 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.2■□□□□ 0.02
CSNK1DP48730 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1DP48730 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms