Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AP000845.1-201ENST00000581677 2131 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 PIN1P1-201ENST00000412108 996 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 AL442647.2-201ENST00000429864 857 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 MYCLP2-201ENST00000449268 967 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AC120045.2-201ENST00000567334 178 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 MIR8072-201ENST00000614241 80 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AC007431.3-201ENST00000623221 587 ntBASIC13.61□□□□□ -0.23
CSNK1A1P48729 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSNK1A1P48729 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSNK1A1P48729 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 C1QBPP1-201ENST00000400117 770 ntBASIC13.6□□□□□ -0.23
CSNK1A1P48729 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 AC092552.1-201ENST00000547243 906 ntBASIC13.6□□□□□ -0.23
CSNK1A1P48729 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms