Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 AC232323.1-201ENST00000540724 2099 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 REXO1L5P-201ENST00000622260 2098 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KRT6CP48668 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.86□□□□□ -0.03
KRT6CP48668 AL359183.1-201ENST00000623796 2132 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.86□□□□□ -0.03
KRT6CP48668 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
KRT6CP48668 AC092580.3-201ENST00000430932 139 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.86□□□□□ -0.03
KRT6CP48668 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.86□□□□□ -0.03
KRT6CP48668 AC097493.3-201ENST00000509725 367 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 AP001160.2-201ENST00000596071 487 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.86□□□□□ -0.03
KRT6CP48668 AC093028.1-201ENST00000622998 982 ntBASIC14.86□□□□□ -0.03
KRT6CP48668 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.86□□□□□ -0.03
KRT6CP48668 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
KRT6CP48668 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KRT6CP48668 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT6CP48668 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
KRT6CP48668 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
KRT6CP48668 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT6CP48668 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.85□□□□□ -0.03
KRT6CP48668 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 BTBD7P1-201ENST00000447253 1453 ntBASIC14.85□□□□□ -0.03
KRT6CP48668 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KRT6CP48668 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 TREML5P-201ENST00000421694 576 ntBASIC14.85□□□□□ -0.03
KRT6CP48668 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT6CP48668 AC241585.1-201ENST00000433527 519 ntBASIC14.85□□□□□ -0.03
KRT6CP48668 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.85□□□□□ -0.03
KRT6CP48668 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.85□□□□□ -0.03
KRT6CP48668 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.85□□□□□ -0.03
KRT6CP48668 IGHV3-42-201ENST00000520410 361 ntBASIC14.85□□□□□ -0.03
KRT6CP48668 AC092337.1-201ENST00000568699 1129 ntBASIC14.85□□□□□ -0.03
KRT6CP48668 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT6CP48668 AL590560.3-201ENST00000623350 461 ntBASIC14.85□□□□□ -0.03
KRT6CP48668 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
KRT6CP48668 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6CP48668 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
KRT6CP48668 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms