Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 KRT8P44-201ENST00000441609 1350 ntBASIC12.5□□□□□ -0.41
CEACAM3P40198 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 KRT8P22-201ENST00000562317 1415 ntBASIC12.5□□□□□ -0.41
CEACAM3P40198 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 AL138799.1-201ENST00000448213 1675 ntBASIC12.5□□□□□ -0.41
CEACAM3P40198 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 CICP4-201ENST00000447359 2812 ntBASIC12.49□□□□□ -0.41
CEACAM3P40198 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 AC112693.3-201ENST00000624819 1983 ntBASIC12.49□□□□□ -0.41
CEACAM3P40198 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.49□□□□□ -0.41
CEACAM3P40198 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.49□□□□□ -0.41
CEACAM3P40198 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 BX539320.1-201ENST00000623759 877 ntBASIC12.49□□□□□ -0.41
CEACAM3P40198 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CEACAM3P40198 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.49□□□□□ -0.41
CEACAM3P40198 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CEACAM3P40198 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.48□□□□□ -0.41
CEACAM3P40198 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.48□□□□□ -0.41
CEACAM3P40198 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.48□□□□□ -0.41
CEACAM3P40198 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 ELK1P1-201ENST00000485699 580 ntBASIC12.48□□□□□ -0.41
CEACAM3P40198 GAPDHP40-201ENST00000505218 1006 ntBASIC12.48□□□□□ -0.41
CEACAM3P40198 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms