Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 ACTBP8-201ENST00000403258 1108 ntBASIC13.06□□□□□ -0.32
CDKN1AP38936 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.06□□□□□ -0.32
CDKN1AP38936 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.06□□□□□ -0.32
CDKN1AP38936 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.06□□□□□ -0.32
CDKN1AP38936 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 AC132938.4-201ENST00000623835 848 ntBASIC13.06□□□□□ -0.32
CDKN1AP38936 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 LRRC59-203ENST00000576448 1531 ntBASIC13.06□□□□□ -0.32
CDKN1AP38936 AC148477.4-201ENST00000613430 1793 ntBASIC13.06□□□□□ -0.32
CDKN1AP38936 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.06□□□□□ -0.32
CDKN1AP38936 MTHFR-217ENST00000641820 1569 ntBASIC13.06□□□□□ -0.32
CDKN1AP38936 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.06□□□□□ -0.32
CDKN1AP38936 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 CICP4-201ENST00000447359 2812 ntBASIC13.06□□□□□ -0.32
CDKN1AP38936 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.06□□□□□ -0.32
CDKN1AP38936 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AL009178.2-201ENST00000597278 2719 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 TPM3P8-201ENST00000330554 643 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.05□□□□□ -0.32
CDKN1AP38936 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 MTX1P1-201ENST00000440904 838 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 HOMER2P2-201ENST00000451621 847 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.05□□□□□ -0.32
CDKN1AP38936 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AP001258.2-201ENST00000529891 490 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.05□□□□□ -0.32
CDKN1AP38936 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.05□□□□□ -0.32
CDKN1AP38936 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.05□□□□□ -0.32
CDKN1AP38936 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 AL139099.5-201ENST00000635274 300 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 AC006453.4-201ENST00000636949 1252 ntBASIC13.05□□□□□ -0.32
CDKN1AP38936 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.05□□□□□ -0.32
CDKN1AP38936 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CDKN1AP38936 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.05□□□□□ -0.32
CDKN1AP38936 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDKN1AP38936 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.04□□□□□ -0.32
CDKN1AP38936 AL365203.3-201ENST00000609742 2057 ntBASIC13.04□□□□□ -0.32
CDKN1AP38936 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDKN1AP38936 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDKN1AP38936 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.04□□□□□ -0.32
CDKN1AP38936 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDKN1AP38936 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms