Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCN1P35523 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CLCN1P35523 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 AL355306.1-201ENST00000415580 579 ntBASIC17.43■□□□□ 0.38
CLCN1P35523 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.43■□□□□ 0.38
CLCN1P35523 ADH5P3-201ENST00000433842 1137 ntBASIC17.43■□□□□ 0.38
CLCN1P35523 FAM58CP-201ENST00000435741 640 ntBASIC17.43■□□□□ 0.38
CLCN1P35523 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCN1P35523 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCN1P35523 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCN1P35523 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN1P35523 AKAP8P1-201ENST00000434743 1349 ntBASIC17.43■□□□□ 0.38
CLCN1P35523 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLCN1P35523 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN1P35523 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 AC068760.1-201ENST00000493579 1953 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 WASH3P-207ENST00000560956 1394 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 FO538757.1-201ENST00000623083 1397 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLCN1P35523 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 OS9-218ENST00000551035 2246 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN1P35523 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCN1P35523 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLCN1P35523 TFAMP1-201ENST00000412727 736 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 AC004832.2-201ENST00000426397 482 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCN1P35523 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCN1P35523 AL135744.1-201ENST00000565098 629 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 AC073389.1-201ENST00000595595 795 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 AC018529.2-202ENST00000611482 3087 ntBASIC17.42■□□□□ 0.38
CLCN1P35523 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN1P35523 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLCN1P35523 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms