Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 WASH3P-207ENST00000560956 1394 ntBASIC20.17■□□□□ 0.82
USP6P35125 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 AC098935.1-201ENST00000446057 611 ntBASIC20.17■□□□□ 0.82
USP6P35125 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
USP6P35125 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.17■□□□□ 0.82
USP6P35125 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
USP6P35125 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
USP6P35125 AC026803.1-201ENST00000569130 274 ntBASIC20.17■□□□□ 0.82
USP6P35125 AC007718.1-201ENST00000621078 280 ntBASIC20.17■□□□□ 0.82
USP6P35125 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.17■□□□□ 0.82
USP6P35125 AC136621.1-201ENST00000624017 2304 ntBASIC20.17■□□□□ 0.82
USP6P35125 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
USP6P35125 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
USP6P35125 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USP6P35125 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USP6P35125 TMBIM7P-202ENST00000641474 1516 ntBASIC20.16■□□□□ 0.82
USP6P35125 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.16■□□□□ 0.82
USP6P35125 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.16■□□□□ 0.82
USP6P35125 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.16■□□□□ 0.82
USP6P35125 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 XBP1P1-201ENST00000436573 652 ntBASIC20.16■□□□□ 0.82
USP6P35125 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.16■□□□□ 0.82
USP6P35125 AL035414.1-201ENST00000451327 857 ntBASIC20.16■□□□□ 0.82
USP6P35125 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.16■□□□□ 0.82
USP6P35125 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 POU5F1P2-201ENST00000521750 823 ntBASIC20.16■□□□□ 0.82
USP6P35125 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
USP6P35125 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.16■□□□□ 0.82
USP6P35125 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.16■□□□□ 0.82
USP6P35125 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.16■□□□□ 0.82
USP6P35125 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 AL805961.1-201ENST00000642026 753 ntBASIC20.16■□□□□ 0.82
USP6P35125 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.16■□□□□ 0.82
USP6P35125 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6P35125 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
USP6P35125 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.15■□□□□ 0.82
USP6P35125 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP6P35125 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
USP6P35125 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
USP6P35125 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.15■□□□□ 0.82
USP6P35125 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.15■□□□□ 0.82
USP6P35125 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.15■□□□□ 0.82
USP6P35125 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.15■□□□□ 0.82
USP6P35125 NDUFS6P1-201ENST00000485187 316 ntBASIC20.15■□□□□ 0.82
USP6P35125 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.15■□□□□ 0.82
USP6P35125 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.15■□□□□ 0.82
USP6P35125 AC011491.1-203ENST00000637688 543 ntBASIC20.15■□□□□ 0.82
USP6P35125 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
USP6P35125 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.15■□□□□ 0.82
USP6P35125 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.15■□□□□ 0.82
USP6P35125 FRMPD2B-201ENST00000431305 1347 ntBASIC20.15■□□□□ 0.82
USP6P35125 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP6P35125 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6P35125 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
USP6P35125 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP6P35125 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP6P35125 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP6P35125 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
USP6P35125 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
USP6P35125 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6P35125 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
USP6P35125 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.14■□□□□ 0.81
USP6P35125 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6P35125 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
USP6P35125 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms