Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC022145.2-201ENST00000598203 171 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.9□□□□□ -0.02
EPHA3P29320 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.9□□□□□ -0.02
EPHA3P29320 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EPHA3P29320 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 AC107918.4-201ENST00000641966 3141 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
EPHA3P29320 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
EPHA3P29320 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 KRT18P32-201ENST00000424695 1287 ntBASIC14.89□□□□□ -0.03
EPHA3P29320 HTR5BP-201ENST00000430851 1154 ntBASIC14.89□□□□□ -0.03
EPHA3P29320 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.89□□□□□ -0.03
EPHA3P29320 ALG1L5P-201ENST00000482043 771 ntBASIC14.89□□□□□ -0.03
EPHA3P29320 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.89□□□□□ -0.03
EPHA3P29320 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.89□□□□□ -0.03
EPHA3P29320 AL645728.2-202ENST00000641679 227 ntBASIC14.89□□□□□ -0.03
EPHA3P29320 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 AC005252.3-201ENST00000623855 2258 ntBASIC14.89□□□□□ -0.03
EPHA3P29320 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA3P29320 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.89□□□□□ -0.03
EPHA3P29320 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA3P29320 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.88□□□□□ -0.03
EPHA3P29320 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 AC092135.3-201ENST00000624151 1846 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 MIR940-201ENST00000401276 94 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 MKNK2P1-201ENST00000437526 628 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
EPHA3P29320 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.88□□□□□ -0.03
EPHA3P29320 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 AC105339.1-204ENST00000636249 355 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 PTENP1-202ENST00000532280 3996 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 AC015802.1-201ENST00000588104 1449 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms