Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.07□□□□□ -0.16
ABCD3P28288 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ABCD3P28288 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 AC233724.13-201ENST00000598383 410 ntBASIC14.07□□□□□ -0.16
ABCD3P28288 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ABCD3P28288 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
ABCD3P28288 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 REXO1L2P-201ENST00000425429 2069 ntBASIC14.06□□□□□ -0.16
ABCD3P28288 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 AC005229.1-201ENST00000392885 409 ntBASIC14.06□□□□□ -0.16
ABCD3P28288 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.06□□□□□ -0.16
ABCD3P28288 ACTBP8-201ENST00000403258 1108 ntBASIC14.06□□□□□ -0.16
ABCD3P28288 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 HLA-K-203ENST00000430151 1046 ntBASIC14.06□□□□□ -0.16
ABCD3P28288 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 AL355864.2-201ENST00000447420 863 ntBASIC14.06□□□□□ -0.16
ABCD3P28288 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.06□□□□□ -0.16
ABCD3P28288 AP001889.1-201ENST00000525414 633 ntBASIC14.06□□□□□ -0.16
ABCD3P28288 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.06□□□□□ -0.16
ABCD3P28288 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.06□□□□□ -0.16
ABCD3P28288 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ABCD3P28288 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ABCD3P28288 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ABCD3P28288 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.06□□□□□ -0.16
ABCD3P28288 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.06□□□□□ -0.16
ABCD3P28288 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ABCD3P28288 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms