Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
VAMP1P23763 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.98□□□□□ -0.33
VAMP1P23763 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.98□□□□□ -0.33
VAMP1P23763 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.98□□□□□ -0.33
VAMP1P23763 AL121772.3-201ENST00000610840 674 ntBASIC12.98□□□□□ -0.33
VAMP1P23763 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP1P23763 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.98□□□□□ -0.33
VAMP1P23763 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP1P23763 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
VAMP1P23763 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 CICP8-201ENST00000455800 2813 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC12.97□□□□□ -0.33
VAMP1P23763 AC092474.2-201ENST00000424288 719 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 PHKG1P2-201ENST00000457537 863 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 AC073648.2-201ENST00000510116 352 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.97□□□□□ -0.33
VAMP1P23763 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.97□□□□□ -0.33
VAMP1P23763 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 ADAM3B-201ENST00000569937 840 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms