Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
ERCC3P19447 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC3P19447 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC3P19447 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC3P19447 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
ERCC3P19447 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC3P19447 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC3P19447 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ERCC3P19447 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.66■□□□□ 0.42
ERCC3P19447 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.66■□□□□ 0.42
ERCC3P19447 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 RN7SL48P-201ENST00000579283 293 ntBASIC17.66■□□□□ 0.42
ERCC3P19447 EEF1DP1-201ENST00000585891 896 ntBASIC17.66■□□□□ 0.42
ERCC3P19447 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.66■□□□□ 0.42
ERCC3P19447 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.66■□□□□ 0.42
ERCC3P19447 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ERCC3P19447 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
ERCC3P19447 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.66■□□□□ 0.42
ERCC3P19447 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ERCC3P19447 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ERCC3P19447 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC3P19447 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 AC092127.1-201ENST00000567093 3455 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC3P19447 TPM3P8-201ENST00000330554 643 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC3P19447 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ERCC3P19447 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 NUS1P3-201ENST00000423502 862 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC3P19447 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.65■□□□□ 0.42
ERCC3P19447 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC3P19447 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC3P19447 AC104982.3-201ENST00000581995 514 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 PRSS30P-206ENST00000641773 873 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 AL354989.2-201ENST00000435838 1540 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 AC015818.8-201ENST00000587907 1519 ntBASIC17.65■□□□□ 0.42
ERCC3P19447 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms