Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 KRT18P43-201ENST00000469825 1281 ntBASIC15.27■□□□□ 0.04
XRCC1P18887 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.27■□□□□ 0.04
XRCC1P18887 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.27■□□□□ 0.04
XRCC1P18887 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.27■□□□□ 0.04
XRCC1P18887 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.27■□□□□ 0.04
XRCC1P18887 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 BRI3BPP1-201ENST00000594224 787 ntBASIC15.27■□□□□ 0.04
XRCC1P18887 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.27■□□□□ 0.04
XRCC1P18887 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.27■□□□□ 0.04
XRCC1P18887 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.27■□□□□ 0.04
XRCC1P18887 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
XRCC1P18887 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
XRCC1P18887 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.27■□□□□ 0.03
XRCC1P18887 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 AC126365.1-201ENST00000578585 1514 ntBASIC15.27■□□□□ 0.03
XRCC1P18887 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC1P18887 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.27■□□□□ 0.03
XRCC1P18887 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.27■□□□□ 0.03
XRCC1P18887 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 AC117489.1-201ENST00000625169 3217 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC1P18887 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC1P18887 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC1P18887 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC1P18887 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.26■□□□□ 0.03
XRCC1P18887 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.26■□□□□ 0.03
XRCC1P18887 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 RPL13AP25-201ENST00000484130 612 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 GIMAP3P-201ENST00000495150 836 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC1P18887 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC1P18887 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 AC132938.2-201ENST00000579188 680 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 IGHV3-72-202ENST00000621503 303 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 AL033527.5-201ENST00000641382 801 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 AL591163.1-201ENST00000641757 987 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
XRCC1P18887 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 AL121723.1-201ENST00000445194 1519 ntBASIC15.26■□□□□ 0.03
XRCC1P18887 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC1P18887 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
XRCC1P18887 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XRCC1P18887 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC1P18887 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC1P18887 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.25■□□□□ 0.03
XRCC1P18887 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.25■□□□□ 0.03
XRCC1P18887 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.25■□□□□ 0.03
XRCC1P18887 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.25■□□□□ 0.03
XRCC1P18887 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 MROH4P-201ENST00000431302 1578 ntBASIC15.25■□□□□ 0.03
XRCC1P18887 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
XRCC1P18887 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms