Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ATF1P18846 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.45□□□□□ -0.26
ATF1P18846 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ATF1P18846 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ATF1P18846 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.44□□□□□ -0.26
ATF1P18846 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
ATF1P18846 AP000344.2-201ENST00000512987 629 ntBASIC13.44□□□□□ -0.26
ATF1P18846 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.44□□□□□ -0.26
ATF1P18846 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.44□□□□□ -0.26
ATF1P18846 AC004835.2-201ENST00000603762 682 ntBASIC13.44□□□□□ -0.26
ATF1P18846 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 AC107918.4-201ENST00000641966 3141 ntBASIC13.44□□□□□ -0.26
ATF1P18846 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
ATF1P18846 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.44□□□□□ -0.26
ATF1P18846 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATF1P18846 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms