Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.5□□□□□ -0.41
DEFA4P12838 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.5□□□□□ -0.41
DEFA4P12838 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.5□□□□□ -0.41
DEFA4P12838 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
DEFA4P12838 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 AC079781.4-201ENST00000641908 219 ntBASIC12.5□□□□□ -0.41
DEFA4P12838 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
DEFA4P12838 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
DEFA4P12838 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
DEFA4P12838 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.5□□□□□ -0.41
DEFA4P12838 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 AC140479.7-201ENST00000636301 2332 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.49□□□□□ -0.41
DEFA4P12838 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 AC127383.1-201ENST00000444697 1800 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 AC148477.4-201ENST00000613430 1793 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
DEFA4P12838 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 AC254562.1-201ENST00000417586 456 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA4P12838 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 CNN2P11-201ENST00000429351 262 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA4P12838 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA4P12838 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 AC026150.2-201ENST00000564693 1156 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA4P12838 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 MIR4313-201ENST00000580760 101 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 AC009093.7-201ENST00000623853 1223 ntBASIC12.49□□□□□ -0.41
DEFA4P12838 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms