Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 AL133267.1-201ENST00000398220 340 ntBASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RPSAP52-203ENST00000622976 1023 ntBASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TMIGD3P0DMS9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 LINC00552-201ENST00000625151 2579 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 CROCCP4-201ENST00000457096 498 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AP005482.1-201ENST00000563722 1273 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AC009486.1-201ENST00000569860 813 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AL022328.1-201ENST00000610050 478 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AC133552.6-201ENST00000613406 534 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms