Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.27■□□□□ 0.19
FAM228BP0C875 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.27■□□□□ 0.19
FAM228BP0C875 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
FAM228BP0C875 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FAM228BP0C875 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FAM228BP0C875 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 AC005840.4-201ENST00000541242 2494 ntBASIC16.26■□□□□ 0.19
FAM228BP0C875 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 AC093525.8-201ENST00000624099 1342 ntBASIC16.26■□□□□ 0.19
FAM228BP0C875 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM228BP0C875 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 AC067863.1-201ENST00000494933 530 ntBASIC16.26■□□□□ 0.19
FAM228BP0C875 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 AL691403.2-201ENST00000618460 490 ntBASIC16.26■□□□□ 0.19
FAM228BP0C875 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM228BP0C875 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 AL161772.1-201ENST00000610494 4412 ntBASIC16.26■□□□□ 0.19
FAM228BP0C875 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM228BP0C875 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM228BP0C875 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM228BP0C875 AC023090.2-201ENST00000625182 2110 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM228BP0C875 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC041040.2-201ENST00000622926 2899 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 AL137783.1-201ENST00000623494 1896 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 BTBD7P1-201ENST00000447253 1453 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM228BP0C875 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM228BP0C875 MIR943-201ENST00000401286 94 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 MIR1233-2-201ENST00000408138 82 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 MIR1233-1-201ENST00000408722 82 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 AC241585.1-201ENST00000433527 519 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM228BP0C875 FAM86GP-201ENST00000448322 971 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.25■□□□□ 0.19
FAM228BP0C875 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 DUX4L27-201ENST00000554796 1261 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM228BP0C875 AC079781.4-201ENST00000641908 219 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM228BP0C875 DRD5P1-201ENST00000456605 1438 ntBASIC16.25■□□□□ 0.19
FAM228BP0C875 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM228BP0C875 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
FAM228BP0C875 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM228BP0C875 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FAM228BP0C875 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.24■□□□□ 0.19
FAM228BP0C875 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM228BP0C875 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FAM228BP0C875 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FAM228BP0C875 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms