Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 AC148477.4-201ENST00000613430 1793 ntBASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 KRT8P14-201ENST00000414254 1442 ntBASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB40ALP0C0E4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AC127383.1-201ENST00000444697 1800 ntBASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 AL136379.1-201ENST00000623471 2642 ntBASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40ALP0C0E4 FAM45BP-202ENST00000592932 1624 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 MIR326-201ENST00000362220 95 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AL590640.2-201ENST00000457038 527 ntBASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40ALP0C0E4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms