Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP2P08253 AL603764.1-201ENST00000636452 321 ntBASIC15.3■□□□□ 0.04
MMP2P08253 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
MMP2P08253 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP2P08253 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP2P08253 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP2P08253 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MMP2P08253 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP2P08253 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP2P08253 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.29■□□□□ 0.04
MMP2P08253 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 AC092933.1-201ENST00000393644 945 ntBASIC15.29■□□□□ 0.04
MMP2P08253 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.29■□□□□ 0.04
MMP2P08253 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP2P08253 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.29■□□□□ 0.04
MMP2P08253 AC015936.2-201ENST00000593177 259 ntBASIC15.29■□□□□ 0.04
MMP2P08253 AC012645.4-201ENST00000610691 1061 ntBASIC15.29■□□□□ 0.04
MMP2P08253 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP2P08253 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MMP2P08253 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP2P08253 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP2P08253 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MMP2P08253 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP2P08253 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
MMP2P08253 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP2P08253 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MMP2P08253 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MMP2P08253 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP2P08253 AC005229.1-201ENST00000392885 409 ntBASIC15.28■□□□□ 0.04
MMP2P08253 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP2P08253 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP2P08253 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.28■□□□□ 0.04
MMP2P08253 CR383656.12-201ENST00000549567 513 ntBASIC15.28■□□□□ 0.04
MMP2P08253 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MMP2P08253 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MMP2P08253 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MMP2P08253 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms