Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.66■□□□□ 0.1
RHOP08100 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.66■□□□□ 0.1
RHOP08100 HINT2P1-201ENST00000419438 481 ntBASIC15.66■□□□□ 0.1
RHOP08100 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.66■□□□□ 0.1
RHOP08100 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.66■□□□□ 0.1
RHOP08100 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.66■□□□□ 0.1
RHOP08100 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.66■□□□□ 0.1
RHOP08100 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.66■□□□□ 0.1
RHOP08100 DUX4L46-201ENST00000566845 751 ntBASIC15.66■□□□□ 0.1
RHOP08100 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 RN7SL574P-201ENST00000581512 297 ntBASIC15.66■□□□□ 0.1
RHOP08100 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.66■□□□□ 0.1
RHOP08100 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.66■□□□□ 0.1
RHOP08100 AL805961.1-203ENST00000641078 1258 ntBASIC15.66■□□□□ 0.1
RHOP08100 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RHOP08100 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.66■□□□□ 0.1
RHOP08100 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RHOP08100 AC011270.2-201ENST00000624293 2550 ntBASIC15.66■□□□□ 0.1
RHOP08100 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHOP08100 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RHOP08100 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.65■□□□□ 0.1
RHOP08100 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.65■□□□□ 0.1
RHOP08100 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 AC091046.1-201ENST00000331871 207 ntBASIC15.65■□□□□ 0.1
RHOP08100 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 AC010141.1-201ENST00000411585 623 ntBASIC15.65■□□□□ 0.1
RHOP08100 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.65■□□□□ 0.1
RHOP08100 MARK2P5-201ENST00000507649 634 ntBASIC15.65■□□□□ 0.1
RHOP08100 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RHOP08100 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.65■□□□□ 0.1
RHOP08100 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.65■□□□□ 0.1
RHOP08100 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.65■□□□□ 0.1
RHOP08100 AC090164.2-201ENST00000611487 516 ntBASIC15.65■□□□□ 0.1
RHOP08100 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.65■□□□□ 0.1
RHOP08100 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RHOP08100 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.65■□□□□ 0.1
RHOP08100 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RHOP08100 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHOP08100 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RHOP08100 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.64■□□□□ 0.09
RHOP08100 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RHOP08100 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.64■□□□□ 0.09
RHOP08100 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RHOP08100 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.64■□□□□ 0.09
RHOP08100 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 RN7SKP230-201ENST00000365642 335 ntBASIC15.64■□□□□ 0.09
RHOP08100 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.64■□□□□ 0.09
RHOP08100 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.64■□□□□ 0.09
RHOP08100 AC012618.1-201ENST00000461223 412 ntBASIC15.64■□□□□ 0.09
RHOP08100 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.64■□□□□ 0.09
RHOP08100 NUP210P1-202ENST00000504322 710 ntBASIC15.64■□□□□ 0.09
RHOP08100 AC134698.3-201ENST00000523880 214 ntBASIC15.64■□□□□ 0.09
RHOP08100 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RHOP08100 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RHOP08100 AL136295.7-201ENST00000619226 1200 ntBASIC15.64■□□□□ 0.09
RHOP08100 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RHOP08100 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.64■□□□□ 0.09
RHOP08100 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RHOP08100 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms