Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SPCS2P4-201ENST00000436160 681 ntBASIC12.72□□□□□ -0.37
CTSDP07339 HIST3H2BA-201ENST00000436555 524 ntBASIC12.72□□□□□ -0.37
CTSDP07339 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSDP07339 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSDP07339 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 AC243562.1-201ENST00000560672 389 ntBASIC12.72□□□□□ -0.37
CTSDP07339 LINC01225-203ENST00000563550 1244 ntBASIC12.72□□□□□ -0.37
CTSDP07339 AC106730.1-201ENST00000566722 1090 ntBASIC12.72□□□□□ -0.37
CTSDP07339 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
CTSDP07339 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.71□□□□□ -0.37
CTSDP07339 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 SPDYE17-201ENST00000412399 783 ntBASIC12.71□□□□□ -0.37
CTSDP07339 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.71□□□□□ -0.37
CTSDP07339 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.71□□□□□ -0.37
CTSDP07339 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 SLED1-202ENST00000512051 380 ntBASIC12.71□□□□□ -0.37
CTSDP07339 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSDP07339 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CTSDP07339 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.71□□□□□ -0.37
CTSDP07339 RARRES2P9-201ENST00000565168 469 ntBASIC12.71□□□□□ -0.37
CTSDP07339 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.71□□□□□ -0.37
CTSDP07339 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CTSDP07339 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSDP07339 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CTSDP07339 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
CTSDP07339 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.71□□□□□ -0.38
CTSDP07339 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.71□□□□□ -0.38
CTSDP07339 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.71□□□□□ -0.38
CTSDP07339 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTSDP07339 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.71□□□□□ -0.38
CTSDP07339 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 LILRP1-201ENST00000444199 1370 ntBASIC12.7□□□□□ -0.38
CTSDP07339 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms