Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.17■□□□□ 0.34
TPM3P06753 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 RNA5SP419-201ENST00000515908 135 ntBASIC17.17■□□□□ 0.34
TPM3P06753 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.17■□□□□ 0.34
TPM3P06753 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.17■□□□□ 0.34
TPM3P06753 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.17■□□□□ 0.34
TPM3P06753 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 AC104692.2-201ENST00000603054 253 ntBASIC17.17■□□□□ 0.34
TPM3P06753 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 TET3-201ENST00000305799 5174 ntTSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TPM3P06753 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.17■□□□□ 0.34
TPM3P06753 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TPM3P06753 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TPM3P06753 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.16■□□□□ 0.34
TPM3P06753 AC007967.2-201ENST00000432613 625 ntBASIC17.16■□□□□ 0.34
TPM3P06753 IGHV3-62-201ENST00000520057 340 ntBASIC17.16■□□□□ 0.34
TPM3P06753 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.16■□□□□ 0.34
TPM3P06753 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.16■□□□□ 0.34
TPM3P06753 AC034105.1-201ENST00000563488 319 ntBASIC17.16■□□□□ 0.34
TPM3P06753 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.16■□□□□ 0.34
TPM3P06753 AP000842.3-202ENST00000569238 1080 ntBASIC17.16■□□□□ 0.34
TPM3P06753 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.16■□□□□ 0.34
TPM3P06753 AC138969.3-201ENST00000546612 1459 ntBASIC17.16■□□□□ 0.34
TPM3P06753 AC138932.2-201ENST00000548268 1459 ntBASIC17.16■□□□□ 0.34
TPM3P06753 AC126755.4-201ENST00000549796 1459 ntBASIC17.16■□□□□ 0.34
TPM3P06753 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TPM3P06753 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TPM3P06753 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 AC089987.1-201ENST00000551654 2209 ntBASIC17.16■□□□□ 0.34
TPM3P06753 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TPM3P06753 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPM3P06753 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TPM3P06753 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TPM3P06753 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.15■□□□□ 0.34
TPM3P06753 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.15■□□□□ 0.34
TPM3P06753 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 MIR346-201ENST00000362234 95 ntBASIC17.15■□□□□ 0.34
TPM3P06753 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TPM3P06753 MRPL3P1-201ENST00000400109 1033 ntBASIC17.15■□□□□ 0.34
TPM3P06753 AZGP1P1-201ENST00000411909 902 ntBASIC17.15■□□□□ 0.34
TPM3P06753 TPT1P11-201ENST00000458482 498 ntBASIC17.15■□□□□ 0.34
TPM3P06753 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.15■□□□□ 0.34
TPM3P06753 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.15■□□□□ 0.34
TPM3P06753 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.15■□□□□ 0.34
TPM3P06753 KRT8P23-201ENST00000560090 1207 ntBASIC17.15■□□□□ 0.34
TPM3P06753 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.15■□□□□ 0.34
TPM3P06753 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms