Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR3DP05423 AL139094.1-201ENST00000405549 1188 ntBASIC18.22■□□□□ 0.51
POLR3DP05423 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR3DP05423 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.22■□□□□ 0.51
POLR3DP05423 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR3DP05423 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 AC091951.1-201ENST00000512854 2465 ntBASIC18.22■□□□□ 0.51
POLR3DP05423 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3DP05423 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR3DP05423 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
POLR3DP05423 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLR3DP05423 AC078819.1-201ENST00000547454 765 ntBASIC18.21■□□□□ 0.51
POLR3DP05423 AC012085.1-201ENST00000548270 765 ntBASIC18.21■□□□□ 0.51
POLR3DP05423 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR3DP05423 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR3DP05423 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.21■□□□□ 0.51
POLR3DP05423 AC138951.2-201ENST00000623455 1161 ntBASIC18.21■□□□□ 0.51
POLR3DP05423 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR3DP05423 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
POLR3DP05423 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR3DP05423 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR3DP05423 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR3DP05423 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLR3DP05423 TNRC18P2-201ENST00000417666 2714 ntBASIC18.21■□□□□ 0.5
POLR3DP05423 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
POLR3DP05423 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
POLR3DP05423 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
POLR3DP05423 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
POLR3DP05423 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
POLR3DP05423 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
POLR3DP05423 YBX1P6-201ENST00000442962 1002 ntBASIC18.2■□□□□ 0.5
POLR3DP05423 AC092658.1-201ENST00000505836 891 ntBASIC18.2■□□□□ 0.5
POLR3DP05423 RNA5SP412-201ENST00000516234 123 ntBASIC18.2■□□□□ 0.5
POLR3DP05423 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.2■□□□□ 0.5
POLR3DP05423 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR3DP05423 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
POLR3DP05423 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR3DP05423 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms