Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC9.18□□□□□ -0.94
APOBP04114 AL592076.1-201ENST00000424448 303 ntBASIC9.18□□□□□ -0.94
APOBP04114 AC092580.1-201ENST00000433998 658 ntBASIC9.18□□□□□ -0.94
APOBP04114 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC9.18□□□□□ -0.94
APOBP04114 OR5BD1P-201ENST00000532527 817 ntBASIC9.18□□□□□ -0.94
APOBP04114 F11R-204ENST00000537746 1245 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 AC002044.2-201ENST00000624910 970 ntBASIC9.18□□□□□ -0.94
APOBP04114 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 CES3-203ENST00000543856 3178 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC9.18□□□□□ -0.94
APOBP04114 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC9.18□□□□□ -0.94
APOBP04114 AC067931.2-201ENST00000623655 2003 ntBASIC9.18□□□□□ -0.94
APOBP04114 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 CICP13-201ENST00000422015 2789 ntBASIC9.17□□□□□ -0.94
APOBP04114 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 RN7SL277P-201ENST00000481521 288 ntBASIC9.17□□□□□ -0.94
APOBP04114 RN7SL530P-201ENST00000485097 298 ntBASIC9.17□□□□□ -0.94
APOBP04114 AL590235.1-201ENST00000564650 861 ntBASIC9.17□□□□□ -0.94
APOBP04114 TRMT112P3-201ENST00000580149 358 ntBASIC9.17□□□□□ -0.94
APOBP04114 AC073592.2-201ENST00000623062 780 ntBASIC9.17□□□□□ -0.94
APOBP04114 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 AL603832.2-201ENST00000566195 2125 ntBASIC9.17□□□□□ -0.94
APOBP04114 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 NKILA-202ENST00000614771 2598 ntBASIC9.17□□□□□ -0.94
APOBP04114 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 ACTG1P19-201ENST00000418987 1116 ntBASIC9.17□□□□□ -0.94
APOBP04114 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 USB1-205ENST00000561743 1135 ntTSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 AL118522.1-201ENST00000611368 560 ntBASIC9.17□□□□□ -0.94
APOBP04114 MIR6746-201ENST00000620971 63 ntBASIC9.17□□□□□ -0.94
APOBP04114 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 AC092570.1-201ENST00000414446 469 ntBASIC9.17□□□□□ -0.94
APOBP04114 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC9.17□□□□□ -0.94
APOBP04114 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC9.17□□□□□ -0.94
APOBP04114 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
APOBP04114 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
APOBP04114 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
APOBP04114 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
APOBP04114 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
APOBP04114 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms