Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 AC006504.4-201ENST00000592118 1568 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 AC073439.1-201ENST00000624121 1774 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 HMGA1P7-201ENST00000406908 502 ntBASIC12.12□□□□□ -0.47
IFNA1P01562 RBM17P3-201ENST00000417687 1192 ntBASIC12.12□□□□□ -0.47
IFNA1P01562 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 RPS15P9-201ENST00000494093 319 ntBASIC12.12□□□□□ -0.47
IFNA1P01562 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 TPSP2-201ENST00000561760 610 ntBASIC12.12□□□□□ -0.47
IFNA1P01562 AC024267.1-201ENST00000582320 895 ntBASIC12.12□□□□□ -0.47
IFNA1P01562 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 AC138894.3-201ENST00000603787 634 ntBASIC12.12□□□□□ -0.47
IFNA1P01562 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
IFNA1P01562 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IFNA1P01562 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
IFNA1P01562 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
IFNA1P01562 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms