Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
UPK1BO75841 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
UPK1BO75841 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 VENTXP1-201ENST00000569334 2716 ntBASIC13.3□□□□□ -0.28
UPK1BO75841 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
UPK1BO75841 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
UPK1BO75841 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.3□□□□□ -0.28
UPK1BO75841 KRT18P34-201ENST00000488218 1270 ntBASIC13.3□□□□□ -0.28
UPK1BO75841 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.3□□□□□ -0.28
UPK1BO75841 KRT8P26-201ENST00000534154 1276 ntBASIC13.3□□□□□ -0.28
UPK1BO75841 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.3□□□□□ -0.28
UPK1BO75841 MIR4515-201ENST00000584082 81 ntBASIC13.3□□□□□ -0.28
UPK1BO75841 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 AC097359.3-201ENST00000603982 1210 ntBASIC13.3□□□□□ -0.28
UPK1BO75841 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.3□□□□□ -0.28
UPK1BO75841 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.3□□□□□ -0.28
UPK1BO75841 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
UPK1BO75841 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.3□□□□□ -0.28
UPK1BO75841 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.3□□□□□ -0.28
UPK1BO75841 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
UPK1BO75841 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UPK1BO75841 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK1BO75841 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.29□□□□□ -0.28
UPK1BO75841 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK1BO75841 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
UPK1BO75841 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK1BO75841 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 AC139887.3-201ENST00000568585 713 ntBASIC13.29□□□□□ -0.28
UPK1BO75841 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK1BO75841 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.29□□□□□ -0.28
UPK1BO75841 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 PMS2P7-201ENST00000506558 1336 ntBASIC13.29□□□□□ -0.28
UPK1BO75841 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UPK1BO75841 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UPK1BO75841 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK1BO75841 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms