Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 BEND3P1-201ENST00000421591 1944 ntBASIC11.51□□□□□ -0.57
SNAI2O43623 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.51□□□□□ -0.57
SNAI2O43623 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SNAI2O43623 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.51□□□□□ -0.57
SNAI2O43623 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 AC140479.7-201ENST00000636301 2332 ntBASIC11.51□□□□□ -0.57
SNAI2O43623 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 FOXO1B-201ENST00000504678 1527 ntBASIC11.5□□□□□ -0.57
SNAI2O43623 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 AL136982.4-201ENST00000437689 1740 ntBASIC11.5□□□□□ -0.57
SNAI2O43623 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SNAI2O43623 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.5□□□□□ -0.57
SNAI2O43623 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.5□□□□□ -0.57
SNAI2O43623 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.5□□□□□ -0.57
SNAI2O43623 HNRNPUP1-201ENST00000554987 333 ntBASIC11.5□□□□□ -0.57
SNAI2O43623 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.5□□□□□ -0.57
SNAI2O43623 AC097359.3-201ENST00000603982 1210 ntBASIC11.5□□□□□ -0.57
SNAI2O43623 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.5□□□□□ -0.57
SNAI2O43623 MIR7706-201ENST00000613747 67 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms