Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 FAM58DP-201ENST00000428076 619 ntBASIC14.89□□□□□ -0.03
HDAC3O15379 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 KRT18P43-201ENST00000469825 1281 ntBASIC14.89□□□□□ -0.03
HDAC3O15379 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HDAC3O15379 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.89□□□□□ -0.03
HDAC3O15379 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 AL079307.3-201ENST00000556114 283 ntBASIC14.89□□□□□ -0.03
HDAC3O15379 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HDAC3O15379 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.89□□□□□ -0.03
HDAC3O15379 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HDAC3O15379 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDAC3O15379 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 AL121723.1-201ENST00000445194 1519 ntBASIC14.88□□□□□ -0.03
HDAC3O15379 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HDAC3O15379 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 RPL13P2-201ENST00000440687 659 ntBASIC14.88□□□□□ -0.03
HDAC3O15379 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.88□□□□□ -0.03
HDAC3O15379 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.88□□□□□ -0.03
HDAC3O15379 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.88□□□□□ -0.03
HDAC3O15379 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 AC025048.3-201ENST00000590609 569 ntBASIC14.88□□□□□ -0.03
HDAC3O15379 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.88□□□□□ -0.03
HDAC3O15379 AC120114.3-201ENST00000611923 658 ntBASIC14.88□□□□□ -0.03
HDAC3O15379 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.88□□□□□ -0.03
HDAC3O15379 AC005702.4-201ENST00000618393 416 ntBASIC14.88□□□□□ -0.03
HDAC3O15379 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HDAC3O15379 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.88□□□□□ -0.03
HDAC3O15379 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.88□□□□□ -0.03
HDAC3O15379 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDAC3O15379 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC3O15379 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC3O15379 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC3O15379 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
HDAC3O15379 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC3O15379 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC3O15379 AC004832.2-201ENST00000426397 482 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms