Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FAU-201ENST00000279259 461 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD1O14646 KRT18P4-201ENST00000422599 1288 ntBASIC23.71■■□□□ 1.39
CHD1O14646 RHOQP2-201ENST00000449922 579 ntBASIC23.71■■□□□ 1.39
CHD1O14646 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC23.71■■□□□ 1.39
CHD1O14646 AC008026.2-201ENST00000495438 348 ntBASIC23.71■■□□□ 1.39
CHD1O14646 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC23.71■■□□□ 1.39
CHD1O14646 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD1O14646 VENTXP3-201ENST00000546480 773 ntBASIC23.71■■□□□ 1.39
CHD1O14646 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC23.71■■□□□ 1.39
CHD1O14646 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC23.71■■□□□ 1.39
CHD1O14646 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD1O14646 AC124068.2-201ENST00000569473 1109 ntBASIC23.71■■□□□ 1.39
CHD1O14646 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD1O14646 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CHD1O14646 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC23.71■■□□□ 1.39
CHD1O14646 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD1O14646 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CHD1O14646 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC23.7■■□□□ 1.39
CHD1O14646 OR10N1P-201ENST00000392758 869 ntBASIC23.7■■□□□ 1.39
CHD1O14646 OLA1P2-201ENST00000395519 1264 ntBASIC23.7■■□□□ 1.39
CHD1O14646 AC098657.1-201ENST00000416270 1135 ntBASIC23.7■■□□□ 1.39
CHD1O14646 CDCA4P4-201ENST00000435216 680 ntBASIC23.7■■□□□ 1.39
CHD1O14646 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
CHD1O14646 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC23.7■■□□□ 1.39
CHD1O14646 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC23.7■■□□□ 1.39
CHD1O14646 MIR6893-201ENST00000613458 69 ntBASIC23.7■■□□□ 1.39
CHD1O14646 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 FKBP4P8-201ENST00000610931 1369 ntBASIC23.7■■□□□ 1.38
CHD1O14646 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC23.7■■□□□ 1.38
CHD1O14646 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD1O14646 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CHD1O14646 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC23.7■■□□□ 1.38
CHD1O14646 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC23.7■■□□□ 1.38
CHD1O14646 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD1O14646 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CHD1O14646 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 SEPHS2P1-201ENST00000511618 1162 ntBASIC23.7■■□□□ 1.38
CHD1O14646 AC090136.2-201ENST00000517809 420 ntBASIC23.7■■□□□ 1.38
CHD1O14646 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD1O14646 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC23.7■■□□□ 1.38
CHD1O14646 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1O14646 LILRP1-201ENST00000444199 1370 ntBASIC23.69■■□□□ 1.38
CHD1O14646 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CHD1O14646 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1O14646 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC23.69■■□□□ 1.38
CHD1O14646 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD1O14646 BRD7P5-201ENST00000299197 1822 ntBASIC23.69■■□□□ 1.38
CHD1O14646 AL596087.1-201ENST00000400979 1969 ntBASIC23.69■■□□□ 1.38
CHD1O14646 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1O14646 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1O14646 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1O14646 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD1O14646 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC23.69■■□□□ 1.38
CHD1O14646 MVK-217ENST00000639206 367 ntTSL 5 BASIC23.69■■□□□ 1.38
CHD1O14646 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1O14646 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
CHD1O14646 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1O14646 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1O14646 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 AC007613.1-201ENST00000572811 2597 ntBASIC23.68■■□□□ 1.38
CHD1O14646 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 PPP1R2P4-201ENST00000424051 595 ntBASIC23.68■■□□□ 1.38
CHD1O14646 AC104961.1-201ENST00000427605 771 ntBASIC23.68■■□□□ 1.38
CHD1O14646 AC108724.1-201ENST00000481669 352 ntBASIC23.68■■□□□ 1.38
CHD1O14646 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC23.68■■□□□ 1.38
CHD1O14646 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1O14646 AC078814.4-201ENST00000546650 327 ntBASIC23.68■■□□□ 1.38
CHD1O14646 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC23.68■■□□□ 1.38
CHD1O14646 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1O14646 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.68■■□□□ 1.38
CHD1O14646 AGGF1P1-201ENST00000509500 2073 ntBASIC23.68■■□□□ 1.38
CHD1O14646 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1O14646 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1O14646 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
CHD1O14646 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1O14646 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms