Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 KRASP1-201ENST00000407852 552 ntBASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 AL353807.1-201ENST00000427475 662 ntBASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 RHEB-204ENST00000472642 900 ntTSL 3 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 AC013467.2-201ENST00000605472 835 ntBASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 AC131212.1-201ENST00000613771 668 ntBASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 KRT8P49-201ENST00000604166 1432 ntBASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 STX16-205ENST00000361830 4318 ntTSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 TP73-207ENST00000378290 1831 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 FRMPD1-202ENST00000377765 4971 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 CAPN10-AS1-201ENST00000567819 4000 ntBASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 AC096633.1-201ENST00000422446 749 ntBASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms