Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 AC005089.1-201ENST00000619486 2241 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 DNAJB3-202ENST00000449667 1266 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 HLA-J-203ENST00000494367 1087 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 AC011467.4-201ENST00000594891 528 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 AC074044.1-201ENST00000609673 707 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 AC140479.7-201ENST00000636301 2332 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.7□□□□□ -0.22
TVP23AA6NH52 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 REXO1L4P-201ENST00000605109 1937 ntBASIC13.7□□□□□ -0.22
TVP23AA6NH52 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TVP23AA6NH52 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 KRT18P43-201ENST00000469825 1281 ntBASIC13.69□□□□□ -0.22
TVP23AA6NH52 AC125807.1-201ENST00000483097 614 ntBASIC13.69□□□□□ -0.22
TVP23AA6NH52 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 AC004449.1-201ENST00000564240 433 ntBASIC13.69□□□□□ -0.22
TVP23AA6NH52 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 AC073592.8-201ENST00000624126 511 ntBASIC13.69□□□□□ -0.22
TVP23AA6NH52 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TVP23AA6NH52 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms