Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AL157414.3-201ENST00000624276 1954 ntBASIC13.31□□□□□ -0.28
SHISA3A0PJX4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AC079140.1-201ENST00000508039 487 ntBASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AC145285.3-201ENST00000564603 959 ntBASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AC105021.1-202ENST00000570572 669 ntBASIC13.3□□□□□ -0.28
SHISA3A0PJX4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AC092902.6-201ENST00000641783 218 ntBASIC13.3□□□□□ -0.28
SHISA3A0PJX4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHISA3A0PJX4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC019294.4-201ENST00000561777 2905 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AL133267.1-201ENST00000398220 340 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 RN7SL589P-201ENST00000481268 310 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms