Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 AL135744.1-201ENST00000565098 629 ntBASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 AC064836.3-201ENST00000607928 673 ntBASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 Z83851.2-201ENST00000609564 659 ntBASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 AC005252.3-201ENST00000623855 2258 ntBASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV18A0A075B6X5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TFAMP1-201ENST00000412727 736 ntBASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AL671277.1-201ENST00000429656 993 ntBASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 KRT18P2-201ENST00000447938 1258 ntBASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC079781.3-201ENST00000449110 356 ntBASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 PDPK2P-202ENST00000562415 1191 ntBASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms