Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 MIR648-201ENST00000385046 94 ntBASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 CD8B2-202ENST00000417670 633 ntBASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 AC138951.2-201ENST00000623455 1161 ntBASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 AHCYP2-201ENST00000430630 1300 ntBASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGA9Q9Y5G4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 AC004945.1-201ENST00000416738 983 ntBASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 CALR4P-201ENST00000431943 946 ntBASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 FAM197Y7-201ENST00000432892 766 ntBASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGA9Q9Y5G4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC078819.1-201ENST00000547454 765 ntBASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC012085.1-201ENST00000548270 765 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms