Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 BRWD1P1-201ENST00000401091 371 ntBASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 BCRP2-202ENST00000447763 634 ntBASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 BCRP6-201ENST00000510112 632 ntBASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 BCRP7-201ENST00000511549 544 ntBASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 AC133539.2-201ENST00000604757 467 ntBASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 AC103702.1-201ENST00000548801 2630 ntBASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB1Q9Y5F3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AL596257.1-201ENST00000641463 2694 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 BCYRN1-201ENST00000418539 200 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AL442647.2-201ENST00000429864 857 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AL355994.2-201ENST00000447882 704 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 FAM86LP-201ENST00000478302 853 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 RPL13AP25-201ENST00000484130 612 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AC004066.1-201ENST00000502488 802 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AL359711.2-201ENST00000563105 872 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 AL022328.1-201ENST00000610050 478 ntBASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHB1Q9Y5F3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PCDHB1Q9Y5F3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms