Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 INTS4P2-202ENST00000614726 2019 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC134915.1-201ENST00000426461 574 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 INE1-201ENST00000456273 945 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 RPL13AP25-201ENST00000484130 612 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC092658.1-201ENST00000505836 891 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC133539.2-201ENST00000604757 467 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 IGHV3-72-202ENST00000621503 303 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AL033527.5-201ENST00000641382 801 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC104640.1-201ENST00000562617 2109 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC073347.1-201ENST00000421633 2643 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AC084364.1-201ENST00000551967 1556 ntBASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
RPH3AQ9Y2J0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPH3AQ9Y2J0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPH3AQ9Y2J0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPH3AQ9Y2J0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPH3AQ9Y2J0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AC011495.1-201ENST00000498085 584 ntBASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 BRI3BPP1-201ENST00000594224 787 ntBASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 MYO15B-237ENST00000642007 4893 ntBASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms