Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC139530.3-201ENST00000620344 690 ntBASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 CETN4P-206ENST00000642099 2168 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TCAF1P1-201ENST00000414990 2232 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AC092135.3-201ENST00000624151 1846 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AC018892.3-201ENST00000623986 2499 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AC109322.1-201ENST00000524499 1264 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 AL589739.1-201ENST00000607720 493 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TUBB3P1-201ENST00000405796 1332 ntBASIC11.24□□□□□ -0.61
HHLA3Q9XRX5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms