Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COPS3Q9UNS2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COPS3Q9UNS2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.69□□□□□ -0.22
COPS3Q9UNS2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COPS3Q9UNS2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 BX640514.1-201ENST00000583223 1918 ntBASIC13.68□□□□□ -0.22
COPS3Q9UNS2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 Z97205.2-201ENST00000564697 1639 ntBASIC13.68□□□□□ -0.22
COPS3Q9UNS2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 YBX1P5-201ENST00000509441 847 ntBASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AF228730.6-201ENST00000641497 218 ntBASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AC084121.3-201ENST00000641716 218 ntBASIC13.68□□□□□ -0.22
COPS3Q9UNS2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COPS3Q9UNS2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 LINC01230-201ENST00000625222 3017 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AL080243.2-201ENST00000418783 582 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AC025048.3-201ENST00000590609 569 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AC025181.2-201ENST00000606994 802 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 MIR6080-201ENST00000617359 66 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AC005702.4-201ENST00000618393 416 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 LINC00628-201ENST00000628516 1289 ntBASIC13.67□□□□□ -0.22
COPS3Q9UNS2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms