Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 KRT8P35-201ENST00000483942 1338 ntBASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 AC012441.1-201ENST00000446669 685 ntBASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 MIR5189-201ENST00000577370 114 ntBASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC3Q9UN70 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 AC055811.4-201ENST00000624039 1754 ntBASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 LRRC59-203ENST00000576448 1531 ntBASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 AC010319.3-201ENST00000597028 470 ntBASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 MSTO2P-201ENST00000314835 1709 ntBASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC3Q9UN70 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms