Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 REXO1L4P-201ENST00000605109 1937 ntBASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AL161772.1-201ENST00000610494 4412 ntBASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 MIR1202-201ENST00000408529 83 ntBASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCF1Q9UBD9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 POM121L8P-201ENST00000417732 1281 ntBASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 POM121L9P-203ENST00000441984 1285 ntBASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 RN7SL560P-201ENST00000577943 264 ntBASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCF1Q9UBD9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms