Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CICP11-201ENST00000434745 2827 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.27■□□□□ 0.51
RTFDC1Q9BY42 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTFDC1Q9BY42 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTFDC1Q9BY42 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
RTFDC1Q9BY42 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTFDC1Q9BY42 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 AC087045.2-201ENST00000606279 1003 ntBASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.26■□□□□ 0.51
RTFDC1Q9BY42 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AL355334.1-201ENST00000417713 215 ntBASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AC009884.2-201ENST00000603110 324 ntBASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AC092171.5-201ENST00000608012 942 ntBASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 AL805961.1-201ENST00000642026 753 ntBASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTFDC1Q9BY42 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTFDC1Q9BY42 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms