Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO3Q9BXY4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RSPO3Q9BXY4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 MIR661-201ENST00000384842 89 ntBASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 RFPL4AP1-201ENST00000530883 850 ntBASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AC104581.4-201ENST00000623126 3052 ntBASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms