Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
ARID3AQ99856 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.55■□□□□ 0.4
ARID3AQ99856 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.55■□□□□ 0.4
ARID3AQ99856 AC069335.1-201ENST00000489972 472 ntBASIC17.55■□□□□ 0.4
ARID3AQ99856 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.55■□□□□ 0.4
ARID3AQ99856 AC073389.1-201ENST00000595595 795 ntBASIC17.55■□□□□ 0.4
ARID3AQ99856 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.55■□□□□ 0.4
ARID3AQ99856 AL691403.2-201ENST00000618460 490 ntBASIC17.55■□□□□ 0.4
ARID3AQ99856 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
ARID3AQ99856 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.55■□□□□ 0.4
ARID3AQ99856 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.55■□□□□ 0.4
ARID3AQ99856 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ARID3AQ99856 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.55■□□□□ 0.4
ARID3AQ99856 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 AL390755.1-201ENST00000623716 2027 ntBASIC17.55■□□□□ 0.4
ARID3AQ99856 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ARID3AQ99856 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ARID3AQ99856 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ARID3AQ99856 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARID3AQ99856 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ARID3AQ99856 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 AL589702.1-201ENST00000641229 1509 ntBASIC17.54■□□□□ 0.4
ARID3AQ99856 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 AC142381.1-201ENST00000426099 345 ntBASIC17.54■□□□□ 0.4
ARID3AQ99856 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.54■□□□□ 0.4
ARID3AQ99856 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.54■□□□□ 0.4
ARID3AQ99856 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.54■□□□□ 0.4
ARID3AQ99856 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.54■□□□□ 0.4
ARID3AQ99856 AC008267.7-201ENST00000624570 1194 ntBASIC17.54■□□□□ 0.4
ARID3AQ99856 AL513210.1-201ENST00000629608 234 ntBASIC17.54■□□□□ 0.4
ARID3AQ99856 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.54■□□□□ 0.4
ARID3AQ99856 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 U82695.1-201ENST00000635752 1889 ntBASIC17.54■□□□□ 0.4
ARID3AQ99856 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ARID3AQ99856 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARID3AQ99856 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
ARID3AQ99856 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.53■□□□□ 0.4
ARID3AQ99856 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.53■□□□□ 0.4
ARID3AQ99856 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ARID3AQ99856 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.53■□□□□ 0.4
ARID3AQ99856 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.53■□□□□ 0.4
ARID3AQ99856 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.53■□□□□ 0.4
ARID3AQ99856 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.53■□□□□ 0.4
ARID3AQ99856 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARID3AQ99856 REXO1L2P-201ENST00000425429 2069 ntBASIC17.53■□□□□ 0.4
ARID3AQ99856 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms