Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AC092933.1-201ENST00000393644 945 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AC079776.1-201ENST00000401540 1152 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 ACA64.2-201ENST00000459014 129 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AL512343.1-201ENST00000605837 169 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AC145423.3-201ENST00000615987 467 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AP002414.2-201ENST00000591780 3365 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AL596257.1-201ENST00000641463 2694 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 MROH4P-201ENST00000431302 1578 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 BOLA2P3-201ENST00000404566 256 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 C2orf27AP3-201ENST00000434123 579 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 FTH1P14-201ENST00000482930 551 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AP000845.1-201ENST00000581677 2131 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AL354718.3-201ENST00000616414 581 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CR382287.1-201ENST00000623954 586 ntBASIC15.72■□□□□ 0.11
RPRD1AQ96P16 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms